dbCAN-seq: a database of CAZyme sequence and annotation

Gene clsuter ID: MGYG000000140_12|CGC1
Gene ID: MGYG000000140_02303
Location and strand information: 56226 - 58562 (+)
Family: 3.A.7.7.1
Protein type: TC
Protein description: hypothetical protein

Gene clsuter ID: MGYG000000140_12|CGC1
Gene ID: MGYG000000140_02304
Location and strand information: 58594 - 60537 (+)
Family: GH23
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 9.758
Protein molecular weight: 70533.3
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000000140_12|CGC1
Gene ID: MGYG000000140_02305
Location and strand information: 60653 - 61618 (+)
Family: HTH_AraC
Protein type: TF
Protein description: HTH-type transcriptional activator RhaR

Gene clsuter ID: MGYG000000140_12|CGC1
Gene ID: MGYG000000140_02306
Location and strand information: 61749 - 62345 (+)
Family: 3.A.1.31.2
Protein type: TC
Protein description: hypothetical protein

Gene clsuter ID: MGYG000000140_12|CGC1
Gene ID: MGYG000000140_02307
Location and strand information: 62345 - 63097 (+)
Family: 3.A.1.31.2
Protein type: TC
Protein description: Energy-coupling factor transporter transmembrane protein EcfT

Gene clsuter ID: MGYG000000140_12|CGC1
Gene ID: MGYG000000140_02308
Location and strand information: 63094 - 64560 (+)
Family: 3.A.1.31.2
Protein type: TC
Protein description: Putative HMP/thiamine import ATP-binding protein YkoD

Gene clsuter ID: MGYG000000140_12|CGC1
Gene ID: MGYG000000140_02309
Location and strand information: 64687 - 66471 (+)
Family: 3.A.1.21.1
Protein type: TC
Protein description: putative ABC transporter ATP-binding protein

Gene clsuter ID: MGYG000000140_12|CGC1
Gene ID: MGYG000000140_02310
Location and strand information: 66472 - 68220 (+)
Family: 3.A.1.106.9
Protein type: TC
Protein description: Putative multidrug export ATP-binding/permease protein

You are here: cgc-> ?help

CGC gene composition diagram

Gene composition table

Genomic location

Protein ID	Protein Name	Type	Start	End	Strand	Signature
MGYG000000140_02303	hypothetical protein	TC	56226	58562	+	3.A.7.7.1
MGYG000000140_02304	hypothetical protein	CAZyme	58594	60537	+	GH23
MGYG000000140_02305	HTH-type transcriptional activator RhaR	TF	60653	61618	+	HTH_AraC
MGYG000000140_02306	hypothetical protein	TC	61749	62345	+	3.A.1.31.2
MGYG000000140_02307	Energy-coupling factor transporter transmembrane protein EcfT	TC	62345	63097	+	3.A.1.31.2
MGYG000000140_02308	Putative HMP/thiamine import ATP-binding protein YkoD	TC	63094	64560	+	3.A.1.31.2
MGYG000000140_02309	putative ABC transporter ATP-binding protein	TC	64687	66471	+	3.A.1.21.1
MGYG000000140_02310	Putative multidrug export ATP-binding/permease protein	TC	66472	68220	+	3.A.1.106.9
Protein ID	Protein Name	Type	Start	End	Strand	Signature